Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| resolvase, n terminal domain protein | M099_2531 | Not Available | Positive | 2728831 - 2729442 | 23063.3 |
| hypothetical protein | M099_2532 | Not Available | Positive | 2729951 - 2730088 | 5065.09 |
| hypothetical protein | M099_2533 | Not Available | Positive | 2730109 - 2730255 | 5834.14 |
| hypothetical protein | M099_2534 | Not Available | Negative | 2730294 - 2730602 | 11884.3 |
| putative aaa-atpase family protein | M099_2535 | Not Available | Negative | 2730850 - 2731056 | 7878.22 |
| tonb-linked outer membrane, susc/raga family protein | M099_2536 | Not Available | Positive | 2731341 - 2734373 | 113273.0 |
| starch-binding associating with outer membrane family protein | M099_2537 | Not Available | Positive | 2734394 - 2736061 | 63375.9 |
| hypothetical protein | M099_2538 | Not Available | Positive | 2736528 - 2737538 | 36399.4 |
| putative alpha-glucosidase domain protein | M099_2539 | Not Available | Positive | 2737849 - 2740572 | 103296.0 |
| glycosyl hydrolases 43 family protein | M099_2540 | Not Available | Positive | 2740624 - 2743011 | 89203.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

