Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_2521 | Not Available | Positive | 2710388 - 2710576 | 6688.22 |
| sulfate permease family protein | M099_2522 | Not Available | Negative | 2710766 - 2712382 | 57851.4 |
| hypothetical protein | M099_2523 | Not Available | Negative | 2712547 - 2712816 | 10154.0 |
| rubrerythrin family protein | M099_2524 | Not Available | Positive | 2712997 - 2713575 | 21626.4 |
| his kinase a domain protein | M099_2525 | Not Available | Negative | 2713669 - 2717619 | 149096.0 |
| hypothetical protein | M099_2526 | Not Available | Negative | 2717796 - 2720984 | 120458.0 |
| hypothetical protein | M099_2527 | Not Available | Positive | 2720986 - 2721159 | 6426.16 |
| starch-binding associating with outer membrane family protein | M099_2528 | Not Available | Negative | 2721292 - 2722911 | 61301.8 |
| tonb-linked outer membrane, susc/raga family protein | M099_2529 | Not Available | Negative | 2722938 - 2725982 | 114150.0 |
| hypothetical protein | M099_2530 | Not Available | Negative | 2726017 - 2728452 | 91139.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

