Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_2511 | Not Available | Positive | 2701371 - 2701502 | 5045.29 |
| hypothetical protein | M099_2512 | Not Available | Negative | 2701468 - 2701593 | 4822.11 |
| quinolinate synthetase complex, a subunit | M099_2513 | Not Available | Negative | 2701590 - 2702582 | 36608.0 |
| cna b-type domain protein | M099_2514 | Not Available | Negative | 2702685 - 2705003 | 88690.1 |
| spou rrna methylase family protein | M099_2515 | Not Available | Positive | 2705725 - 2706261 | 19945.1 |
| hypothetical protein | M099_2516 | Not Available | Negative | 2706292 - 2706798 | 19619.1 |
| hypothetical protein | M099_2517 | Not Available | Positive | 2706820 - 2706936 | 4225.26 |
| helix-hairpin-helix motif family protein | M099_2518 | Not Available | Positive | 2706961 - 2709033 | 81258.1 |
| radical sam superfamily protein | M099_2519 | Not Available | Positive | 2709079 - 2709855 | 29335.2 |
| hypothetical protein | M099_2520 | Not Available | Positive | 2710046 - 2710177 | 5077.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

