Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate coa transferase family protein | M099_2501 | Not Available | Positive | 2684765 - 2686258 | 54010.7 |
| glycosyl hydrolase family 3 c-terminal domain protein | M099_2502 | Not Available | Positive | 2686444 - 2689038 | 96024.0 |
| heme abc exporter, atp-binding protein ccma | M099_2503 | Not Available | Negative | 2689127 - 2690689 | 58289.4 |
| type i phosphodiesterase / nucleotide pyrophosphatase family protein | M099_2504 | Not Available | Negative | 2690976 - 2692502 | 57783.5 |
| wd40-like beta propeller repeat family protein | M099_2505 | Not Available | Positive | 2692635 - 2695859 | 120778.0 |
| hypothetical protein | M099_2506 | Not Available | Negative | 2695964 - 2696104 | 5632.07 |
| leucine--trna ligase | M099_2507 | Not Available | Positive | 2696156 - 2698990 | 108366.0 |
| hypothetical protein | M099_2508 | Not Available | Positive | 2699072 - 2699968 | 33215.4 |
| acetyltransferase family protein | M099_2509 | Not Available | Negative | 2700067 - 2700594 | 20715.6 |
| non-canonical purine ntp pyrophosphatase, rdgb/ham1 family | M099_2510 | Not Available | Positive | 2700754 - 2701335 | 21352.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

