Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna ribosyltransferase-isomerase | M099_2491 | Not Available | Negative | 2677241 - 2678296 | 40182.2 |
| trna pseudouridine(55) synthase | M099_2492 | Not Available | Negative | 2678308 - 2679015 | 26653.3 |
| bacitracin resistance baca family protein | M099_2493 | Not Available | Negative | 2679020 - 2679820 | 28494.0 |
| hypothetical protein | M099_2494 | Not Available | Negative | 2679858 - 2680103 | 9145.44 |
| ftsx-like permease family protein | M099_2495 | Not Available | Negative | 2680116 - 2680985 | 32622.6 |
| methyltransferase domain protein | M099_2496 | Not Available | Negative | 2680988 - 2681854 | 33272.9 |
| pspc domain protein | M099_2497 | Not Available | Positive | 2682022 - 2682258 | 9155.18 |
| fkbp-type peptidyl-prolyl cis-trans isomerase family protein | M099_2498 | Not Available | Negative | 2682268 - 2682669 | 15108.2 |
| pp_02430 | M099_2499 | Not Available | Negative | 2682669 - 2684039 | Not Available |
| hypothetical protein | M099_2500 | Not Available | Positive | 2684377 - 2684727 | 13516.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

