Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_0223 | Not Available | Negative | 243776 - 244528 | 29518.3 |
| lipopolysaccharide-assembly family protein | M099_0224 | Not Available | Negative | 244545 - 245072 | 19738.6 |
| aaa domain family protein | M099_0225 | Not Available | Negative | 245059 - 246324 | 46861.1 |
| myo-inositol-1-phosphate synthase family protein | M099_0226 | Not Available | Negative | 246491 - 247798 | 48823.8 |
| pfkb carbohydrate kinase family protein | M099_0227 | Not Available | Positive | 248003 - 248830 | 30565.4 |
| h+ symporter permease | M099_0228 | Not Available | Negative | 248884 - 250083 | 44345.3 |
| had hydrolase, ia, variant 1 family protein | M099_0229 | Not Available | Negative | 250090 - 250812 | 27108.7 |
| hypothetical protein | M099_0230 | Not Available | Negative | 250817 - 251761 | 35401.4 |
| cdp-alcohol phosphatidyltransferase family protein | M099_0231 | Not Available | Negative | 251815 - 252765 | 37209.4 |
| hypothetical protein | M099_0232 | Not Available | Negative | 252773 - 253624 | 31745.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

