Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa domain family protein | M099_2471 | Not Available | Positive | 2655271 - 2657016 | 66617.1 |
| hypothetical protein | M099_2472 | Not Available | Positive | 2657006 - 2658751 | 65946.9 |
| divergent aaa domain protein | M099_2473 | Not Available | Positive | 2659311 - 2659487 | 6316.75 |
| hypothetical protein | M099_2474 | Not Available | Positive | 2659825 - 2659992 | 6351.49 |
| divergent aaa domain protein | M099_2475 | Not Available | Positive | 2660320 - 2661879 | 59295.6 |
| hypothetical protein | M099_2476 | Not Available | Positive | 2661881 - 2663275 | 56008.5 |
| nuclease-related domain protein | M099_2477 | Not Available | Positive | 2663302 - 2665047 | 66952.5 |
| hypothetical protein | M099_2478 | Not Available | Positive | 2665049 - 2665711 | 25962.3 |
| transposase dde domain protein | M099_2479 | Not Available | Positive | 2665841 - 2667127 | 49642.2 |
| transposase domain protein | M099_2480 | Not Available | Negative | 2667179 - 2667780 | 23260.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

