Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate family protein | M099_2451 | Not Available | Positive | 2633783 - 2634763 | 37164.2 |
| putative membrane protein | M099_2452 | Not Available | Positive | 2634714 - 2635076 | 13830.4 |
| nucleotidyltransferase domain protein | M099_2453 | Not Available | Positive | 2635191 - 2635775 | 22881.3 |
| bacterial regulatory s, luxr family protein | M099_2454 | Not Available | Negative | 2635793 - 2636563 | 29479.4 |
| alpha-galactosidase a domain protein | M099_2455 | Not Available | Negative | 2636614 - 2638221 | 60369.3 |
| Trna-pro | Not Available | Not Available | Positive | 2638503 - 2638575 | Not Available |
| Trna-phe | Not Available | Not Available | Positive | 2638756 - 2638828 | Not Available |
| istb-like atp binding family protein | M099_2458 | Not Available | Negative | 2639322 - 2639846 | 19781.3 |
| hypothetical protein | M099_2459 | Not Available | Positive | 2639836 - 2640048 | 7643.09 |
| hypothetical protein | M099_2460 | Not Available | Negative | 2640089 - 2641045 | 36296.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

