Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglycosylase slt domain protein | M099_2421 | Not Available | Positive | 2595338 - 2596357 | 38235.9 |
| ion transport family protein | M099_2422 | Not Available | Negative | 2596383 - 2597240 | 32741.9 |
| beta galactosidase small chain family protein | M099_2423 | Not Available | Positive | 2597356 - 2600451 | 117501.0 |
| carboxypeptidase regulatory-like domain protein | M099_2424 | Not Available | Positive | 2600883 - 2603414 | 95963.2 |
| rna polymerase sigma-70 factor, expansion 1 family protein | M099_2425 | Not Available | Positive | 2603469 - 2603996 | 20776.9 |
| fecr family protein | M099_2426 | Not Available | Positive | 2603993 - 2605003 | 38704.1 |
| glycosyl hydrolase | M099_2427 | Not Available | Negative | 2605126 - 2606262 | 43537.8 |
| hypothetical protein | M099_2428 | Not Available | Negative | 2606345 - 2606518 | 6632.11 |
| hypothetical protein | M099_2429 | Not Available | Negative | 2606657 - 2606788 | 4666.71 |
| hypothetical protein | M099_2430 | Not Available | Negative | 2606826 - 2607788 | 36318.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

