Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyl-gamma-glutamyl-phosphate reductase | M099_2411 | Not Available | Negative | 2585167 - 2586135 | 35999.4 |
| asparagine synthase family protein | M099_2412 | Not Available | Negative | 2586141 - 2587349 | 45126.7 |
| acetyltransferase family protein | M099_2413 | Not Available | Negative | 2587450 - 2588007 | 20661.0 |
| arginine repressor | M099_2414 | Not Available | Negative | 2588030 - 2588506 | 17529.3 |
| carbohydrate kinase, fggy family | M099_2415 | Not Available | Positive | 2588813 - 2590291 | 55073.9 |
| l-rhamnose isomerase | M099_2416 | Not Available | Positive | 2590334 - 2591587 | 47405.2 |
| l-rhamnose-proton symport family protein | M099_2417 | Not Available | Positive | 2591680 - 2592699 | 36101.1 |
| class ii aldolase and adducin n-terminal domain protein | M099_2418 | Not Available | Positive | 2592785 - 2593594 | 30253.7 |
| hypothetical protein | M099_2419 | Not Available | Positive | 2593803 - 2594300 | 18510.1 |
| bacterial regulatory helix-turn-helix s, arac family protein | M099_2420 | Not Available | Positive | 2594431 - 2595351 | 35143.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

