Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_0213 | Not Available | Negative | 237864 - 238154 | 11221.9 |
| dna replication and repair recf family protein | M099_0214 | Not Available | Negative | 238151 - 239266 | 42967.7 |
| tetratricopeptide repeat family protein | M099_0215 | Not Available | Positive | 239419 - 240096 | 24504.2 |
| 6,7-dimethyl-8-ribityllumazine synthase | M099_0216 | Not Available | Positive | 240252 - 240695 | 15773.1 |
| Trna-tyr | Not Available | Not Available | Positive | 240807 - 240892 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 240899 - 240974 | Not Available |
| cupin domain protein | M099_0219 | Not Available | Positive | 241111 - 241815 | 26544.4 |
| hypothetical protein | M099_0220 | Not Available | Negative | 242038 - 242244 | 7759.67 |
| exodeoxyribonuclease iii | M099_0221 | Not Available | Negative | 242486 - 243241 | 29681.9 |
| preprotein translocase secg subunit | M099_0222 | Not Available | Negative | 243405 - 243650 | 8418.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

