Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa-like domain protein | M099_2371 | Not Available | Positive | 2540535 - 2542979 | 94183.9 |
| hypothetical protein | M099_2372 | Not Available | Positive | 2542976 - 2543548 | 20870.7 |
| hypothetical protein | M099_2373 | Not Available | Positive | 2543573 - 2544118 | 20091.2 |
| putative membrane protein | M099_2374 | Not Available | Positive | 2544123 - 2544920 | 29865.8 |
| putative transmembrane protein | M099_2375 | Not Available | Positive | 2544941 - 2545591 | 24464.3 |
| conjugative transposon tram protein | M099_2376 | Not Available | Positive | 2545682 - 2546563 | 32545.9 |
| hypothetical protein | M099_2377 | Not Available | Positive | 2546724 - 2548094 | 52582.0 |
| hypothetical protein | M099_2378 | Not Available | Negative | 2548077 - 2548763 | 26694.2 |
| conjugative transposon tran protein | M099_2379 | Not Available | Positive | 2548941 - 2549933 | 37851.7 |
| peptidase m23 family protein | M099_2380 | Not Available | Positive | 2549944 - 2550495 | 20640.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

