Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb family c-terminal domain protein | M099_2341 | Not Available | Positive | 2518190 - 2518663 | 17774.8 |
| Trna-asp | Not Available | Not Available | Positive | 2518822 - 2518898 | Not Available |
| hypothetical protein | M099_2343 | Not Available | Positive | 2519135 - 2519719 | 22166.7 |
| acetyltransferase family protein | M099_2344 | Not Available | Negative | 2519712 - 2520248 | 20476.6 |
| putative membrane protein | M099_2345 | Not Available | Negative | 2520245 - 2520715 | 17754.4 |
| recombination protein recr | M099_2346 | Not Available | Negative | 2520736 - 2521353 | 22458.3 |
| solute symporter family protein | M099_2347 | Not Available | Positive | 2521432 - 2522913 | 55350.8 |
| ribosome biogenesis gtp-binding protein ysxc | M099_2348 | Not Available | Positive | 2522879 - 2523481 | 23034.9 |
| hypothetical protein | M099_2349 | Not Available | Negative | 2523595 - 2524332 | 28286.4 |
| putative upi000043effc-like cluster protein | M099_2350 | Not Available | Positive | 2524994 - 2525368 | 14698.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

