Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_2331 | Not Available | Negative | 2509190 - 2509309 | 4441.26 |
| hypothetical protein | M099_2332 | Not Available | Negative | 2509397 - 2509513 | 4513.77 |
| type i phosphodiesterase / nucleotide pyrophosphatase family protein | M099_2333 | Not Available | Positive | 2509614 - 2511140 | 56030.4 |
| cyclic nucleotide-binding domain protein | M099_2334 | Not Available | Negative | 2511421 - 2512011 | 22019.1 |
| hydroxylamine reductase | M099_2335 | Not Available | Positive | 2512126 - 2513784 | 61220.4 |
| iron-sulfur cluster repair di-iron protein | M099_2336 | Not Available | Positive | 2513796 - 2514527 | 27847.1 |
| putative alpha-l-fucosidase | M099_2337 | Not Available | Negative | 2514607 - 2517066 | 91860.4 |
| hypothetical protein | M099_2338 | Not Available | Negative | 2517191 - 2517325 | 4969.13 |
| hypothetical protein | M099_2339 | Not Available | Positive | 2517315 - 2517596 | 11022.6 |
| hypothetical protein | M099_2340 | Not Available | Positive | 2517840 - 2518160 | 12883.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

