Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase, delta/epsilon chain, beta-sandwich domain protein | M099_2321 | Not Available | Negative | 2499804 - 2500058 | 9226.99 |
| atp synthase f1, beta subunit | M099_2322 | Not Available | Negative | 2500067 - 2501602 | 56123.4 |
| peptidase m20/m25/m40 family protein | M099_2323 | Not Available | Negative | 2501798 - 2503345 | 57370.0 |
| glycosyltransferase family 28 c-terminal domain protein | M099_2324 | Not Available | Negative | 2503548 - 2504675 | 43436.4 |
| calcineurin-like phosphoesterase family protein | M099_2325 | Not Available | Negative | 2504672 - 2505475 | 31165.0 |
| putative periplasmic protein | M099_2326 | Not Available | Negative | 2505652 - 2506089 | 16856.3 |
| his kinase a domain protein | M099_2327 | Not Available | Negative | 2506192 - 2507478 | 49706.0 |
| transcriptional regulatory family protein | M099_2328 | Not Available | Negative | 2507479 - 2508156 | 25927.3 |
| putative membrane protein | M099_2329 | Not Available | Negative | 2508153 - 2508275 | 5004.28 |
| nigd-like family protein | M099_2330 | Not Available | Negative | 2508377 - 2509114 | 27816.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

