Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_2301 | Not Available | Negative | 2480496 - 2480639 | 5531.88 |
| uvrd/rep helicase n-terminal domain protein | M099_2302 | Not Available | Positive | 2480781 - 2482838 | 79334.9 |
| hypothetical protein | M099_2303 | Not Available | Positive | 2483081 - 2483218 | 5452.58 |
| hypothetical protein | M099_2304 | Not Available | Negative | 2483213 - 2484091 | 33621.2 |
| hypothetical protein | M099_2305 | Not Available | Positive | 2484193 - 2484333 | 5348.44 |
| putative membrane protein | M099_2306 | Not Available | Positive | 2484338 - 2485696 | 51118.7 |
| phosphonoacetaldehyde hydrolase | M099_2307 | Not Available | Positive | 2485739 - 2486527 | 29135.4 |
| 2-aminoethylphosphonate--pyruvate transaminase | M099_2308 | Not Available | Positive | 2486600 - 2487622 | 38318.9 |
| transposase, mutator family protein | M099_2309 | Not Available | Negative | 2487686 - 2488918 | 46997.8 |
| phosphate-selective porin o and p family protein | M099_2310 | Not Available | Negative | 2489068 - 2490219 | 43091.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

