Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine dehydrogenase | M099_2291 | Not Available | Positive | 2465276 - 2468125 | 105226.0 |
| prolyl oligopeptidase family protein | M099_2292 | Not Available | Negative | 2468406 - 2471120 | 102737.0 |
| hypothetical protein | M099_2293 | Not Available | Negative | 2471153 - 2471350 | 7487.86 |
| putative membrane protein | M099_2294 | Not Available | Positive | 2471513 - 2471740 | 8214.64 |
| formate--tetrahydrofolate ligase family protein | M099_2295 | Not Available | Negative | 2471772 - 2473439 | 60542.1 |
| hypothetical protein | M099_2296 | Not Available | Negative | 2473453 - 2473590 | 5336.9 |
| iron-containing alcohol dehydrogenase family protein | M099_2297 | Not Available | Positive | 2473630 - 2474703 | 39412.9 |
| hypothetical protein | M099_2298 | Not Available | Positive | 2475139 - 2476239 | 43665.2 |
| hypothetical protein | M099_2299 | Not Available | Positive | 2476245 - 2476826 | 23365.4 |
| hypothetical protein | M099_2300 | Not Available | Positive | 2476810 - 2480463 | 144614.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

