Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_2281 | Not Available | Positive | 2455638 - 2456120 | 18358.9 |
| amp-binding enzyme family protein | M099_2282 | Not Available | Positive | 2456332 - 2457996 | 62496.0 |
| lipoyl(octanoyl) transferase | M099_2283 | Not Available | Negative | 2458206 - 2458856 | 24154.3 |
| hypothetical protein | M099_2284 | Not Available | Negative | 2459282 - 2459452 | 6685.31 |
| putative metal-dependent phosphohydrolase | M099_2285 | Not Available | Positive | 2459495 - 2460061 | 22300.7 |
| hypothetical protein | M099_2286 | Not Available | Positive | 2460058 - 2460606 | 20508.7 |
| copper-translocating p-type atpase | M099_2287 | Not Available | Negative | 2460694 - 2462907 | 80014.0 |
| hypothetical protein | M099_2288 | Not Available | Positive | 2463086 - 2463934 | 32059.0 |
| ribosomal rna small subunit methyltransferase g | M099_2289 | Not Available | Positive | 2463955 - 2464584 | 23835.2 |
| metallo-beta-lactamase superfamily protein | M099_2290 | Not Available | Positive | 2464602 - 2465240 | 23832.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

