Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_0203 | Not Available | Positive | 228456 - 229103 | 24461.2 |
| hypothetical protein | M099_0204 | Not Available | Positive | 229188 - 229679 | 18252.0 |
| apbe family protein | M099_0205 | Not Available | Positive | 229693 - 230709 | 37820.5 |
| marc integral membrane family protein | M099_0206 | Not Available | Negative | 230868 - 231470 | 22140.0 |
| transcription regulator, crp family | M099_0207 | Not Available | Positive | 231657 - 232334 | 26004.6 |
| peptidase m3 family protein | M099_0208 | Not Available | Positive | 232492 - 234534 | 77751.2 |
| hypothetical protein | M099_0209 | Not Available | Positive | 234548 - 235042 | 18544.7 |
| cytidine and deoxycytidylate deaminase zinc-binding region family protein | M099_0210 | Not Available | Positive | 235047 - 235481 | 16211.4 |
| c-terminal processing peptidase family protein | M099_0211 | Not Available | Positive | 235523 - 237244 | 63789.3 |
| 5-formyltetrahydrofolate cyclo-ligase | M099_0212 | Not Available | Positive | 237303 - 237698 | 15214.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

