Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| patatin-like phospholipase family protein | M099_2271 | Not Available | Positive | 2447602 - 2449821 | 82325.0 |
| mannonate dehydratase | M099_2272 | Not Available | Negative | 2449804 - 2450982 | 44737.9 |
| pullulanase, type i | M099_2273 | Not Available | Negative | 2451040 - 2453034 | 74697.4 |
| crossover junction endodeoxyribonuclease ruvc | M099_2274 | Not Available | Negative | 2453039 - 2453608 | 21117.3 |
| hypothetical protein | M099_2275 | Not Available | Negative | 2453605 - 2453910 | 11925.3 |
| Trna-ala | Not Available | Not Available | Positive | 2453973 - 2454046 | Not Available |
| hypothetical protein | M099_2277 | Not Available | Negative | 2454483 - 2454602 | 4344.39 |
| hypothetical protein | M099_2278 | Not Available | Negative | 2454699 - 2454908 | 7947.52 |
| hypothetical protein | M099_2279 | Not Available | Negative | 2455077 - 2455391 | 11444.2 |
| hypothetical protein | M099_2280 | Not Available | Negative | 2455469 - 2455639 | 6696.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

