Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pfkb carbohydrate kinase family protein | M099_2251 | Not Available | Negative | 2425101 - 2426123 | 37020.8 |
| periplasmic binding s and sugar binding domain of laci family protein | M099_2252 | Not Available | Positive | 2426367 - 2427440 | 41131.5 |
| d-galactarate dehydratase / altronate hydrolase family protein | M099_2253 | Not Available | Positive | 2427462 - 2428952 | 54186.1 |
| na+/h+ antiporter family protein | M099_2254 | Not Available | Positive | 2429098 - 2430402 | 46607.5 |
| hypothetical protein | M099_2255 | Not Available | Negative | 2430580 - 2431374 | 30439.2 |
| hypothetical protein | M099_2256 | Not Available | Positive | 2432035 - 2432313 | 10143.0 |
| hypothetical protein | M099_2257 | Not Available | Positive | 2432310 - 2432930 | 22330.3 |
| h+ symporter family protein | M099_2258 | Not Available | Negative | 2432993 - 2434654 | 59809.1 |
| ybak / prolyl-trna synthetases associated domain protein | M099_2259 | Not Available | Negative | 2434761 - 2435246 | 17802.8 |
| excinuclease abc subunit a | M099_2260 | Not Available | Negative | 2435261 - 2438089 | 105933.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

