Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin reductase like domain protein | M099_2211 | Not Available | Positive | 2391446 - 2392006 | 20230.2 |
| hypothetical protein | M099_2212 | Not Available | Negative | 2392233 - 2392364 | 4928.19 |
| hypothetical protein | M099_2213 | Not Available | Negative | 2392587 - 2392700 | 4277.97 |
| precorrin-3b c17-methyltransferase | M099_2214 | Not Available | Positive | 2392686 - 2394092 | 51796.8 |
| precorrin-6y c5,15-methyltransferase (decarboxylating), cbit subunit | M099_2215 | Not Available | Positive | 2394097 - 2395278 | 44226.8 |
| precorrin-4 c11-methyltransferase | M099_2216 | Not Available | Positive | 2395300 - 2397111 | 67020.4 |
| cobalamin biosynthesis protein cbid | M099_2217 | Not Available | Positive | 2397137 - 2398933 | 66015.2 |
| abc transporter family protein | M099_2218 | Not Available | Negative | 2398955 - 2399974 | 37541.6 |
| feccd transport family protein | M099_2219 | Not Available | Negative | 2399977 - 2401014 | 36729.8 |
| periplasmic binding family protein | M099_2220 | Not Available | Negative | 2401026 - 2402177 | 43275.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

