Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5,10-methylenetetrahydrofolate reductase | M099_2201 | Not Available | Negative | 2378866 - 2379819 | 35944.1 |
| tonb dependent receptor family protein | M099_2202 | Not Available | Negative | 2380116 - 2382419 | 85921.1 |
| hypothetical protein | M099_2203 | Not Available | Negative | 2382528 - 2382854 | 11915.9 |
| hypothetical protein | M099_2204 | Not Available | Negative | 2383016 - 2383219 | 8038.44 |
| tonb dependent receptor family protein | M099_2205 | Not Available | Positive | 2383348 - 2385525 | 81222.5 |
| periplasmic binding family protein | M099_2206 | Not Available | Positive | 2385539 - 2386696 | 43493.4 |
| 1-deoxy-d-xylulose-5-phosphate synthase | M099_2207 | Not Available | Negative | 2386804 - 2388564 | 64538.6 |
| bacterial regulatory helix-turn-helix s, arac family protein | M099_2208 | Not Available | Negative | 2388751 - 2389638 | 34126.2 |
| bacterial regulatory helix-turn-helix s, arac family protein | M099_2209 | Not Available | Negative | 2389670 - 2390578 | 35396.4 |
| hypothetical protein | M099_2210 | Not Available | Positive | 2390925 - 2391440 | 19023.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

