Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobic ribonucleoside-triphosphate reductase | M099_2191 | Not Available | Negative | 2365406 - 2367499 | 80525.2 |
| hypothetical protein | M099_2192 | Not Available | Positive | 2368328 - 2368462 | 5248.18 |
| acetyl-coa carboxylase, biotin carboxylase subunit | M099_2193 | Not Available | Positive | 2368443 - 2369939 | 56626.0 |
| hlyd secretion family protein | M099_2194 | Not Available | Positive | 2369964 - 2370479 | 19041.9 |
| carboxyl transferase domain protein | M099_2195 | Not Available | Positive | 2370482 - 2372014 | 55922.1 |
| aspt/yide/ybjl antiporter duplication domain protein | M099_2196 | Not Available | Positive | 2372140 - 2373828 | 60888.9 |
| cyclase family protein | M099_2197 | Not Available | Positive | 2373848 - 2374405 | 21451.8 |
| hypothetical protein | M099_2198 | Not Available | Positive | 2374432 - 2374641 | 7700.39 |
| ribonucleoside-diphosphate reductase, alpha subunit | M099_2199 | Not Available | Positive | 2375044 - 2377563 | 95735.6 |
| ribonucleoside-diphosphate reductase subunit beta | M099_2200 | Not Available | Positive | 2377726 - 2378775 | 41348.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

