Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative alpha-l-fucosidase | M099_0193 | Not Available | Negative | 216777 - 219221 | 92011.8 |
| phosphopyruvate hydratase | M099_0194 | Not Available | Positive | 219387 - 220682 | 46741.8 |
| hypothetical protein | M099_0195 | Not Available | Negative | 220787 - 222355 | 60578.0 |
| hypothetical protein | M099_0196 | Not Available | Positive | 222580 - 222729 | 5816.7 |
| hypothetical protein | M099_0197 | Not Available | Negative | 223229 - 223363 | 4853.84 |
| helicase conserved c-terminal domain protein | M099_0198 | Not Available | Negative | 223553 - 225970 | 91680.0 |
| Trna-thr | Not Available | Not Available | Positive | 226081 - 226154 | Not Available |
| hypothetical protein | M099_0200 | Not Available | Positive | 226414 - 226947 | 20508.6 |
| glycosyl transferase 2 family protein | M099_0201 | Not Available | Positive | 226951 - 227904 | 36346.1 |
| hypothetical protein | M099_0202 | Not Available | Positive | 227906 - 228454 | 20757.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

