Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | M099_2161 | Not Available | Positive | 2340688 - 2341725 | 37449.5 |
| cobalamin-5-phosphate synthase family protein | M099_2162 | Not Available | Positive | 2341728 - 2342477 | 27738.7 |
| alpha-ribazole phosphatase | M099_2163 | Not Available | Positive | 2342486 - 2343001 | 19440.9 |
| hypothetical protein | M099_2164 | Not Available | Positive | 2343053 - 2343394 | 12539.8 |
| hypothetical protein | M099_2165 | Not Available | Negative | 2343519 - 2343773 | 9752.07 |
| hypothetical protein | M099_2166 | Not Available | Negative | 2343861 - 2344013 | 5893.38 |
| hypothetical protein | M099_2167 | Not Available | Negative | 2344299 - 2344532 | 8746.16 |
| hypothetical protein | M099_2168 | Not Available | Positive | 2344879 - 2345022 | 5729.0 |
| hypothetical protein | M099_2169 | Not Available | Positive | 2345187 - 2345939 | 26781.6 |
| hypothetical protein | M099_2170 | Not Available | Negative | 2345929 - 2346330 | 15363.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

