Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ahpc/tsa family protein | M099_2151 | Not Available | Negative | 2332243 - 2332737 | 18386.1 |
| phosphoserine phosphatase serb | M099_2152 | Not Available | Positive | 2333010 - 2334242 | 46069.1 |
| helicase conserved c-terminal domain protein | M099_2153 | Not Available | Positive | 2334263 - 2335540 | 47461.1 |
| hypothetical protein | M099_2154 | Not Available | Negative | 2335760 - 2335900 | 5460.61 |
| hypothetical protein | M099_2155 | Not Available | Negative | 2335926 - 2336201 | 10205.1 |
| putative lipoprotein | M099_2156 | Not Available | Negative | 2336251 - 2337015 | 28365.8 |
| sugar dehydrogenase, udp-glucose/gdp-mannose dehydrogenase family | M099_2157 | Not Available | Negative | 2337063 - 2338376 | 48150.3 |
| sporulation related domain protein | M099_2158 | Not Available | Positive | 2338495 - 2339625 | 42127.5 |
| fha domain protein | M099_2159 | Not Available | Positive | 2339641 - 2340165 | 19818.0 |
| cobinamide kinase / cobinamide phosphate guanyltransferase family protein | M099_2160 | Not Available | Positive | 2340170 - 2340679 | 19446.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

