Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter family protein | M099_2141 | Not Available | Positive | 2319169 - 2319843 | 24839.1 |
| ftsx-like permease family protein | M099_2142 | Not Available | Positive | 2320017 - 2322254 | 85475.4 |
| eama-like transporter family protein | M099_2143 | Not Available | Negative | 2322262 - 2323149 | 31789.8 |
| serine palmitoyltransferase | M099_2144 | Not Available | Negative | 2323237 - 2324373 | 42236.3 |
| lipid kinase, yegs/rv2252/bmru family protein | M099_2145 | Not Available | Positive | 2324669 - 2325703 | 38141.2 |
| mycolic acid cyclopropane synthetase family protein | M099_2146 | Not Available | Negative | 2325784 - 2326488 | 26223.4 |
| atp-dependent protease la | M099_2147 | Not Available | Positive | 2326670 - 2329147 | 92665.5 |
| queuine trna-ribosyltransferase | M099_2148 | Not Available | Positive | 2329150 - 2330280 | 42665.6 |
| putative permease yjgp/yjgq family protein | M099_2149 | Not Available | Positive | 2330384 - 2331463 | 41586.3 |
| had hydrolase, ia, variant 3 family protein | M099_2150 | Not Available | Negative | 2331464 - 2332084 | 23389.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

