Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_2131 | Not Available | Positive | 2304767 - 2304991 | 8428.3 |
| Trna-pro | Not Available | Not Available | Positive | 2305010 - 2305084 | Not Available |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase family protein | M099_2133 | Not Available | Negative | 2305243 - 2306550 | 49565.7 |
| aaa domain family protein | M099_2134 | Not Available | Negative | 2306571 - 2307938 | 51877.1 |
| sel1 repeat family protein | M099_2135 | Not Available | Positive | 2308240 - 2309085 | 32040.8 |
| outer membrane efflux family protein | M099_2136 | Not Available | Positive | 2309135 - 2310604 | 55871.3 |
| efflux transporter, rnd family, mfp subunit | M099_2137 | Not Available | Positive | 2310689 - 2311939 | 48109.4 |
| ftsx-like permease family protein | M099_2138 | Not Available | Positive | 2311950 - 2314346 | 92684.7 |
| ftsx-like permease family protein | M099_2139 | Not Available | Positive | 2314360 - 2316729 | 90144.9 |
| ftsx-like permease family protein | M099_2140 | Not Available | Positive | 2316750 - 2319149 | 91432.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

