Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_2121 | Not Available | Negative | 2296919 - 2297263 | 13416.7 |
| flavodoxin | M099_2122 | Not Available | Negative | 2297280 - 2297783 | 17935.1 |
| outer membrane beta-barrel domain protein | M099_2123 | Not Available | Negative | 2298055 - 2298576 | 19772.5 |
| hypothetical protein | M099_2124 | Not Available | Negative | 2298598 - 2299119 | 21224.9 |
| outer membrane insertion c-terminal signal domain protein | M099_2125 | Not Available | Negative | 2299487 - 2300131 | 23066.5 |
| ion transport family protein | M099_2126 | Not Available | Negative | 2300354 - 2301097 | 28315.3 |
| outer membrane beta-barrel domain protein | M099_2127 | Not Available | Negative | 2301279 - 2301956 | 25186.4 |
| mechanosensitive ion channel family protein | M099_2128 | Not Available | Negative | 2301990 - 2302349 | 13631.5 |
| hypothetical protein | M099_2129 | Not Available | Negative | 2302798 - 2302938 | 5721.99 |
| glycosyl transferase 11 family protein | M099_2130 | Not Available | Positive | 2303749 - 2304594 | 33694.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

