Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_2101 | Not Available | Positive | 2278423 - 2278578 | 5781.12 |
| hypothetical protein | M099_2102 | Not Available | Negative | 2278638 - 2279399 | 29014.4 |
| hypothetical protein | M099_2103 | Not Available | Positive | 2279406 - 2279528 | 4482.21 |
| hypothetical protein | M099_2104 | Not Available | Negative | 2279666 - 2279824 | 5847.14 |
| hypothetical protein | M099_2105 | Not Available | Negative | 2280186 - 2280590 | 16044.2 |
| putative aaa-atpase family protein | M099_2106 | Not Available | Negative | 2280644 - 2281219 | 22516.6 |
| hypothetical protein | M099_2107 | Not Available | Negative | 2281334 - 2281489 | 6112.78 |
| pd-(d/e)xk nuclease transposase family protein | M099_2108 | Not Available | Negative | 2281508 - 2282113 | 23748.0 |
| pd-(d/e)xk nuclease transposase family protein | M099_2109 | Not Available | Negative | 2282119 - 2282346 | 8532.12 |
| papain cysteine protease family protein | M099_2110 | Not Available | Negative | 2282696 - 2284072 | 51854.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

