Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress family protein | M099_2081 | Not Available | Positive | 2257165 - 2258292 | 42637.1 |
| hamp domain protein | M099_2082 | Not Available | Positive | 2258305 - 2259774 | 55121.1 |
| mgtc family protein | M099_2083 | Not Available | Negative | 2259845 - 2260507 | 24329.9 |
| rmuc family protein | M099_2084 | Not Available | Negative | 2260531 - 2261766 | 46960.8 |
| haloacid dehalogenase-like hydrolase | M099_2085 | Not Available | Positive | 2261862 - 2262668 | 30297.8 |
| hypothetical protein | M099_2086 | Not Available | Negative | 2262658 - 2263188 | 19120.2 |
| rna recognition motif family protein | M099_2087 | Not Available | Positive | 2263542 - 2263727 | 6877.21 |
| chitobiase/beta-hexosaminidase c-terminal domain protein | M099_2088 | Not Available | Negative | 2263911 - 2266232 | 87122.3 |
| eama-like transporter family protein | M099_2089 | Not Available | Negative | 2266278 - 2267192 | 32976.2 |
| hypothetical protein | M099_2090 | Not Available | Negative | 2267303 - 2267422 | 4365.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

