Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdp-mannose 4,6-dehydratase | M099_0183 | Not Available | Positive | 199754 - 200833 | 40983.1 |
| nad dependent epimerase/dehydratase family protein | M099_0184 | Not Available | Positive | 200854 - 201936 | 41078.3 |
| nucleotidyl transferase family protein | M099_0185 | Not Available | Positive | 201951 - 202994 | 39429.5 |
| hypothetical protein | M099_0186 | Not Available | Positive | 202998 - 203426 | 16940.2 |
| putative alpha-rhamnosidase | M099_0187 | Not Available | Negative | 203589 - 205733 | 81997.7 |
| right handed beta helix region family protein | M099_0188 | Not Available | Negative | 205748 - 207571 | 68546.0 |
| hypothetical protein | M099_0189 | Not Available | Negative | 207596 - 209701 | 78760.8 |
| bacterial alpha-l-rhamnosidase family protein | M099_0190 | Not Available | Negative | 209929 - 213894 | 149621.0 |
| hypothetical protein | M099_0191 | Not Available | Negative | 213909 - 215378 | 56371.4 |
| glycosyl hydrolase family 88 family protein | M099_0192 | Not Available | Negative | 215529 - 216728 | 45387.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

