Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haloacid dehalogenase-like family hydrolase | M099_2071 | Not Available | Negative | 2245325 - 2246014 | 26385.9 |
| chloramphenicol acetyltransferase family protein | M099_2072 | Not Available | Negative | 2246051 - 2246554 | 18766.4 |
| amino acid kinase family protein | M099_2073 | Not Available | Negative | 2246998 - 2248344 | 50812.7 |
| trehalose-phosphatase | M099_2074 | Not Available | Positive | 2248705 - 2250957 | 86564.3 |
| glycosyl hydrolases 15 family protein | M099_2075 | Not Available | Positive | 2250976 - 2252763 | 69821.9 |
| beta-lactamase enzyme family protein | M099_2076 | Not Available | Positive | 2252954 - 2253781 | 31223.3 |
| acetyltransferase family protein | M099_2077 | Not Available | Positive | 2253836 - 2254291 | 17405.2 |
| hypothetical protein | M099_2078 | Not Available | Positive | 2254563 - 2255351 | 29788.4 |
| nudix domain protein | M099_2079 | Not Available | Negative | 2255458 - 2256012 | 21545.7 |
| phage gp37/gp68 family protein | M099_2080 | Not Available | Positive | 2256218 - 2256985 | 29868.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

