Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate binding domain of abc-type glycine betaine transport system family protein | M099_2061 | Not Available | Negative | 2233813 - 2234655 | 31666.2 |
| binding--dependent transport system inner membrane component family protein | M099_2062 | Not Available | Negative | 2234658 - 2235482 | 29538.8 |
| glycine betaine/l-proline transport atp binding subunit | M099_2063 | Not Available | Negative | 2235479 - 2236705 | 45636.3 |
| aaa domain family protein | M099_2064 | Not Available | Positive | 2237007 - 2238344 | 50007.5 |
| macro domain protein | M099_2065 | Not Available | Negative | 2238734 - 2239237 | 17664.2 |
| k+-transporting atpase, a subunit | M099_2066 | Not Available | Positive | 2239735 - 2241441 | 61976.5 |
| k+-transporting atpase, b subunit | M099_2067 | Not Available | Positive | 2241475 - 2243508 | 72461.1 |
| k+-transporting atpase, c subunit | M099_2068 | Not Available | Positive | 2243522 - 2244091 | 20500.6 |
| putative membrane protein | M099_2069 | Not Available | Positive | 2244122 - 2244235 | 4202.37 |
| hypothetical protein | M099_2070 | Not Available | Positive | 2244365 - 2245066 | 25515.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

