Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle-docking protein ftsy | M099_2051 | Not Available | Negative | 2227390 - 2228349 | 34743.9 |
| hypothetical protein | M099_2052 | Not Available | Negative | 2228523 - 2228678 | 5827.19 |
| ribosomal protein l33 | M099_2053 | Not Available | Negative | 2228688 - 2228876 | 7205.97 |
| ribosomal l28 family protein | M099_2054 | Not Available | Negative | 2228897 - 2229067 | 6401.85 |
| competence/damage-inducible cina c-terminal domain protein | M099_2055 | Not Available | Negative | 2229262 - 2229762 | 17534.8 |
| trna threonylcarbamoyl adenosine modification protein ygjd | M099_2056 | Not Available | Negative | 2229784 - 2230803 | 36941.3 |
| methionine aminopeptidase, type i | M099_2057 | Not Available | Negative | 2230827 - 2231681 | 31857.2 |
| hypothetical protein | M099_2058 | Not Available | Positive | 2231918 - 2232136 | 8234.71 |
| bacterial transferase hexapeptide family protein | M099_2059 | Not Available | Negative | 2232196 - 2232747 | 20072.3 |
| eama-like transporter family protein | M099_2060 | Not Available | Negative | 2232760 - 2233668 | 34073.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

