Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen tolerance family protein | M099_2041 | Not Available | Negative | 2216138 - 2217934 | 66228.8 |
| tpr repeat family protein | M099_2042 | Not Available | Negative | 2218013 - 2218720 | 27647.4 |
| aerotolerance regulator family protein | M099_2043 | Not Available | Negative | 2218730 - 2219752 | 37851.1 |
| aerotolerance regulator family protein | M099_2044 | Not Available | Negative | 2219765 - 2220763 | 37238.6 |
| oxygen tolerance family protein | M099_2045 | Not Available | Negative | 2220783 - 2221880 | 41517.0 |
| hypothetical protein | M099_2046 | Not Available | Negative | 2221886 - 2222755 | 33748.5 |
| aaa domain family protein | M099_2047 | Not Available | Negative | 2223005 - 2223919 | 34284.1 |
| bacterial dna-binding family protein | M099_2048 | Not Available | Negative | 2224286 - 2225716 | 52657.7 |
| bacterial dna-binding family protein | M099_2049 | Not Available | Negative | 2225742 - 2225921 | 6761.41 |
| ribosomal protein s12 methylthiotransferase rimo | M099_2050 | Not Available | Negative | 2226088 - 2227386 | 50182.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

