Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase-, dna gyrase b-, and hsp90-like atpase family protein | M099_2031 | Not Available | Negative | 2201292 - 2203337 | 78153.2 |
| istb-like atp binding family protein | M099_2032 | Not Available | Negative | 2203472 - 2205988 | 93877.8 |
| dna gyrase, a subunit | M099_2033 | Not Available | Positive | 2206503 - 2208920 | 90511.8 |
| tpr repeat family protein | M099_2034 | Not Available | Positive | 2208951 - 2210168 | 45948.8 |
| universal stress family protein | M099_2035 | Not Available | Negative | 2210442 - 2211569 | 43139.9 |
| transposase is66 family protein | M099_2036 | Not Available | Negative | 2211646 - 2213211 | 60524.4 |
| putative transposase | M099_2037 | Not Available | Negative | 2213298 - 2213549 | 9706.84 |
| putative dna-binding protein | M099_2038 | Not Available | Negative | 2214183 - 2214365 | 6598.87 |
| pap2 superfamily protein | M099_2039 | Not Available | Negative | 2214582 - 2215289 | 26838.5 |
| tpr repeat family protein | M099_2040 | Not Available | Negative | 2215300 - 2216118 | 30696.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

