Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-terminal processing peptidase family protein | M099_2021 | Not Available | Negative | 2194756 - 2196450 | 63106.7 |
| pfkb carbohydrate kinase family protein | M099_2022 | Not Available | Negative | 2196494 - 2197480 | 35254.9 |
| Trna-asn | Not Available | Not Available | Positive | 2197561 - 2197634 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 2197660 - 2197733 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 2197759 - 2197832 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 2197858 - 2197931 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 2197957 - 2198030 | Not Available |
| transposase family protein | M099_2028 | Not Available | Negative | 2198162 - 2198446 | 11146.5 |
| Trna-arg | Not Available | Not Available | Positive | 2198690 - 2198761 | Not Available |
| patatin-like phospholipase family protein | M099_2030 | Not Available | Negative | 2198853 - 2201162 | 87727.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

