Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal l10 family protein | M099_2001 | Not Available | Negative | 2180181 - 2180699 | 18678.8 |
| ribosomal protein l1 | M099_2002 | Not Available | Negative | 2180715 - 2181413 | 24935.6 |
| ribosomal protein l11 | M099_2003 | Not Available | Negative | 2181429 - 2181767 | 12417.2 |
| transcription termination/antitermination factor nusg | M099_2004 | Not Available | Negative | 2181933 - 2182475 | 20140.3 |
| Trna-trp | Not Available | Not Available | Positive | 2182697 - 2182772 | Not Available |
| translation elongation factor tu | M099_2006 | Not Available | Negative | 2182830 - 2184014 | 43565.6 |
| Trna-thr | Not Available | Not Available | Positive | 2184066 - 2184137 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2184150 - 2184222 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 2184256 - 2184338 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 2184379 - 2184455 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

