Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l4 | M099_1991 | Not Available | Negative | 2164132 - 2164758 | 23045.8 |
| 50s ribosomal protein l3 | M099_1992 | Not Available | Negative | 2164758 - 2165345 | 20905.4 |
| translation elongation factor g | M099_1993 | Not Available | Negative | 2165787 - 2167904 | 77460.5 |
| ribosomal protein s7 | M099_1994 | Not Available | Negative | 2167936 - 2168325 | 14787.8 |
| ribosomal protein s12 | M099_1995 | Not Available | Negative | 2168561 - 2168830 | 9657.8 |
| hypothetical protein | M099_1996 | Not Available | Negative | 2169163 - 2169504 | 12561.0 |
| transposase dde domain protein | M099_1997 | Not Available | Positive | 2170587 - 2171387 | 31375.9 |
| dna-directed rna polymerase, beta' subunit | M099_1998 | Not Available | Negative | 2171520 - 2175806 | 158848.0 |
| dna-directed rna polymerase, beta subunit | M099_1999 | Not Available | Negative | 2175845 - 2179657 | 142493.0 |
| ribosomal protein l7/l12 | M099_2000 | Not Available | Negative | 2179760 - 2180134 | 12654.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

