Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l24 | M099_1981 | Not Available | Negative | 2159878 - 2160201 | 11658.2 |
| ribosomal protein l14 | M099_1982 | Not Available | Negative | 2160222 - 2160587 | 13058.1 |
| 30s ribosomal protein s17 | M099_1983 | Not Available | Negative | 2160590 - 2160847 | 9981.21 |
| ribosomal protein l29 | M099_1984 | Not Available | Negative | 2160859 - 2161053 | 7453.1 |
| ribosomal protein l16 | M099_1985 | Not Available | Negative | 2161060 - 2161494 | 16206.8 |
| ribosomal protein s3 | M099_1986 | Not Available | Negative | 2161516 - 2162247 | 27103.1 |
| ribosomal protein l22 | M099_1987 | Not Available | Negative | 2162254 - 2162664 | 15484.9 |
| ribosomal protein s19 | M099_1988 | Not Available | Negative | 2162701 - 2162907 | 7510.13 |
| ribosomal protein l2 | M099_1989 | Not Available | Negative | 2162993 - 2163814 | 29602.0 |
| ribosomal l23 family protein | M099_1990 | Not Available | Negative | 2163820 - 2164110 | 10804.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

