Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine aminopeptidase, type i | M099_1971 | Not Available | Negative | 2154271 - 2154981 | 25861.0 |
| preprotein translocase, secy subunit | M099_1972 | Not Available | Negative | 2155079 - 2156236 | 42017.4 |
| ribosomal protein l15 | M099_1973 | Not Available | Negative | 2156430 - 2156876 | 15681.0 |
| ribosomal protein l30 | M099_1974 | Not Available | Negative | 2156907 - 2157083 | 6433.21 |
| ribosomal protein s5 | M099_1975 | Not Available | Negative | 2157093 - 2157608 | 17809.8 |
| ribosomal protein l18 | M099_1976 | Not Available | Negative | 2157615 - 2157956 | 12645.5 |
| ribosomal protein l6 | M099_1977 | Not Available | Negative | 2157978 - 2158547 | 20910.5 |
| ribosomal s8 family protein | M099_1978 | Not Available | Negative | 2158562 - 2158885 | 11844.7 |
| ribosomal s14p/s29e family protein | M099_1979 | Not Available | Negative | 2159015 - 2159314 | 11077.7 |
| ribosomal l5 family protein | M099_1980 | Not Available | Negative | 2159321 - 2159878 | 20860.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

