Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_1961 | Not Available | Positive | 2147063 - 2147224 | 5812.07 |
| hypothetical protein | M099_1962 | Not Available | Negative | 2147336 - 2147497 | 6055.46 |
| muts domain iii family protein | M099_1963 | Not Available | Positive | 2147499 - 2149298 | 68575.7 |
| putative transmembrane protein | M099_1964 | Not Available | Negative | 2149393 - 2149932 | 19771.7 |
| hypothetical protein | M099_1965 | Not Available | Negative | 2150051 - 2150476 | 15788.1 |
| ribosomal protein l17 | M099_1966 | Not Available | Negative | 2150887 - 2151318 | 15735.0 |
| dna-directed rna polymerase, alpha subunit | M099_1967 | Not Available | Negative | 2151379 - 2152332 | 36079.2 |
| ribosomal protein s4 | M099_1968 | Not Available | Negative | 2152383 - 2152988 | 22540.2 |
| 30s ribosomal protein s11 | M099_1969 | Not Available | Negative | 2153105 - 2153494 | 13878.8 |
| 30s ribosomal protein s13 | M099_1970 | Not Available | Negative | 2153506 - 2153886 | 14121.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

