Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_1951 | Not Available | Positive | 2139424 - 2140578 | 45151.7 |
| hypothetical protein | M099_1952 | Not Available | Positive | 2140575 - 2141303 | 27234.6 |
| thioesterase superfamily protein | M099_1953 | Not Available | Negative | 2141368 - 2141811 | 16882.2 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein | M099_1954 | Not Available | Positive | 2141934 - 2143211 | 47021.8 |
| short chain dehydrogenase family protein | M099_1955 | Not Available | Positive | 2143222 - 2143950 | 27098.2 |
| hypothetical protein | M099_1956 | Not Available | Positive | 2144287 - 2144772 | 18355.6 |
| rna polymerase sigma factor, sigma-70 family protein | M099_1957 | Not Available | Positive | 2144759 - 2145271 | 19997.8 |
| hypothetical protein | M099_1958 | Not Available | Positive | 2145258 - 2145788 | 20186.3 |
| hypothetical protein | M099_1959 | Not Available | Positive | 2145785 - 2146243 | 17333.2 |
| glycine zipper family protein | M099_1960 | Not Available | Negative | 2146498 - 2147103 | 21646.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

