Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_1921 | Not Available | Positive | 2103771 - 2103899 | 5044.03 |
| hypothetical protein | M099_1922 | Not Available | Positive | 2103935 - 2104225 | 12045.1 |
| archaeal atpase family protein | M099_1923 | Not Available | Negative | 2104614 - 2106614 | 76960.7 |
| hypothetical protein | M099_1924 | Not Available | Negative | 2106611 - 2108047 | 54296.9 |
| hypothetical protein | M099_1925 | Not Available | Positive | 2108356 - 2108475 | 4819.03 |
| toxin-antitoxin system toxin component, pin family | M099_1926 | Not Available | Negative | 2108647 - 2108979 | 12799.2 |
| hypothetical protein | M099_1927 | Not Available | Negative | 2109068 - 2109283 | 8582.31 |
| hypothetical protein | M099_1928 | Not Available | Negative | 2109472 - 2110341 | 32895.1 |
| glycosyl transferases group 1 family protein | M099_1929 | Not Available | Negative | 2110295 - 2111425 | 43962.2 |
| transposase is66 family protein | M099_1930 | Not Available | Negative | 2111675 - 2112046 | 14160.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

