Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c_gcaxxg_c_c family protein | M099_1911 | Not Available | Negative | 2094847 - 2095350 | 18588.2 |
| nad binding domain of 6-phosphogluconate dehydrogenase family protein | M099_1912 | Not Available | Negative | 2095394 - 2096350 | 34387.8 |
| sigma-54 interaction domain protein | M099_1913 | Not Available | Negative | 2096521 - 2097798 | 47220.9 |
| hypothetical protein | M099_1914 | Not Available | Positive | 2097844 - 2097999 | 6271.57 |
| putative lipoprotein | M099_1915 | Not Available | Positive | 2098039 - 2100114 | 78152.4 |
| hypothetical protein | M099_1916 | Not Available | Positive | 2100146 - 2101222 | 39489.4 |
| hypothetical protein | M099_1917 | Not Available | Negative | 2101446 - 2101664 | 8477.29 |
| hypothetical protein | M099_1918 | Not Available | Positive | 2102037 - 2102504 | 16727.9 |
| hypothetical protein | M099_1919 | Not Available | Negative | 2102644 - 2102967 | 11522.0 |
| n-acetylmuramoyl-l-alanine amidase family protein | M099_1920 | Not Available | Positive | 2102944 - 2103180 | 8698.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

