Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transglutaminase-family protein | M099_1901 | Not Available | Negative | 2081440 - 2084103 | 99180.9 |
| ion channel family protein | M099_1902 | Not Available | Negative | 2084185 - 2084919 | 28208.9 |
| hypothetical protein | M099_1903 | Not Available | Negative | 2084946 - 2085062 | 4432.56 |
| amino acid permease family protein | M099_1904 | Not Available | Positive | 2085086 - 2086663 | 56490.7 |
| his kinase a domain protein | M099_1905 | Not Available | Positive | 2086880 - 2089153 | 87676.4 |
| na+/h+ antiporter nhaa | M099_1906 | Not Available | Negative | 2089156 - 2090496 | 48614.6 |
| gtp-binding protein lepa | M099_1907 | Not Available | Negative | 2090628 - 2092409 | 66375.4 |
| hypothetical protein | M099_1908 | Not Available | Negative | 2092529 - 2093179 | 24804.7 |
| recf/recn/smc n terminal domain protein | M099_1909 | Not Available | Negative | 2093198 - 2094286 | 41425.4 |
| hypothetical protein | M099_1910 | Not Available | Negative | 2094487 - 2094690 | 7433.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

