Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| capsule assembly wzi family protein | M099_1881 | Not Available | Positive | 2058891 - 2060279 | 52404.1 |
| hypothetical protein | M099_1882 | Not Available | Positive | 2060338 - 2060718 | 14324.3 |
| fumarase c family protein | M099_1883 | Not Available | Negative | 2060939 - 2062372 | 52225.3 |
| hypothetical protein | M099_1884 | Not Available | Negative | 2062636 - 2063526 | 32573.4 |
| hypothetical protein | M099_1885 | Not Available | Negative | 2063667 - 2065484 | 68890.7 |
| udp-glucose 4-epimerase gale | M099_1886 | Not Available | Negative | 2065838 - 2066872 | 37984.7 |
| hypothetical protein | M099_1887 | Not Available | Negative | 2066905 - 2067801 | 33994.2 |
| electron transport complex, rnfabcdge type, a subunit | M099_1888 | Not Available | Negative | 2067943 - 2068545 | 21298.3 |
| electron transport complex, rnfabcdge type, e subunit | M099_1889 | Not Available | Negative | 2068564 - 2069148 | 20626.5 |
| electron transport complex, rnfabcdge type, g subunit | M099_1890 | Not Available | Negative | 2069163 - 2069918 | 25597.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

