Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase family protein | M099_0163 | Not Available | Negative | 180027 - 180743 | 28273.2 |
| transposase is66 family protein | M099_0164 | Not Available | Positive | 180771 - 181142 | 14160.6 |
| hypothetical protein | M099_0165 | Not Available | Positive | 181475 - 182101 | 23711.8 |
| putative membrane protein | M099_0166 | Not Available | Positive | 182653 - 184179 | 58058.8 |
| glycosyl transferase 2 family protein | M099_0167 | Not Available | Positive | 184176 - 185012 | 32536.1 |
| bacterial transferase hexapeptide family protein | M099_0168 | Not Available | Positive | 185009 - 185611 | 22718.1 |
| glycosyl transferases group 1 family protein | M099_0169 | Not Available | Positive | 185619 - 186836 | 45558.4 |
| putative membrane protein | M099_0170 | Not Available | Positive | 186833 - 188125 | 49994.2 |
| glycosyl transferases group 1 family protein | M099_0171 | Not Available | Positive | 188184 - 189296 | 43293.6 |
| hypothetical protein | M099_0172 | Not Available | Positive | 189304 - 190626 | 49989.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

